2014

 

1)       Cakir, B., Tuncel, A., Hwang, S.K., Okita, T.W. Increase of grain yields by manipulating starch biosynthesis. In: Starch: Metabolism and Structure, (Nakamura, Y., ed.), Springer, Tokyo, Japan. In press.

2)        Tuncel, A., Cakir, B., Hwang, S.K., Okita, T.W. (2014) The role of the large subunit in redox regulation of the rice endosperm ADP-glucose pyrophosphorylase. FEBS J. 281, 4951-4962.

3)        Tuncel, A., Kawaguchi J., Ihara Y., Matsusaka H., Nishi A., Nakamura T., Kuhara S., Hirakawa H., Nakamura Y., Cakir B., Nagamine A., Okita T.W., Hwang S.K., Satoh H. (2014) The rice endosperm ADP-glucose pyrophosphorylase large subunit is essential for optimal catalysis and allosteric regulation … » More …

2013

 

1)        Boehlein, S.K., Shaw, J.R., McCarty, D.R., Hwang, S.K., Stewart, J.D., Hannah, L.C. (2013) The potato tuber, maize endosperm and a chimeric maize-potato ADP-glucose pyrophosphorylase exhibit fundamental differences in Pi inhibition. Arch. Biochem. Biophys. 537, 210-216.

2)        Wakuta, S., Shibata, Y., Yoshizaki, Y., Saburi, W., Hamada, S., Ito, H., Hwang, S.K., Okita, T.W., Matsui, H. (2013) Modulation of allosteric regulation by E38K and G101N mutations in the potato tuber ADP-glucose pyrophosphorylase.  Biosci. Biotechn. Bioch. 77, 1854-1859.

3)        Boehlein, S.K., Shaw, J., Hwang, S.K., Stewart, J., Hannah, L.C. (2013) Deciphering the kinetic mechanisms controlling selected plant ADP-glucose pyrophosphorylases. Arch. Biochem. Biophys. 535, 215-226.

2014

 

Yurgel*, S.N., Y. Qu, J.T. Rice, J.N. Brown, M.S. Lipton, and M.L. Kahn. 2014. Metabolic specialization in a nitrogen-fixing symbiosis: proteome differences between Sinorhizobium medicae bacteria and bacteroids. MPMI. In revision. Provorov, N., O. Onishchuk, S. Yurgel, O. Kurchak, E. Chizhevskaya, N. Vorobyov, T. Zatovaskaya, B. and Simarov. 2014. Engineering of highly-effective symbiotic bacteria for the sustainable crop production: evolutionary research provides a panel of genetic opportunities. Russ. J. Genetics. In press  Yurgel*, S.N., J. Lynch, J. Rice, N. Adhikari, and S. Roje. 2014. Quantification of flavin production by bacteria. Bio-protocol. 4(15). Yurgel*, S.N., N. Sa, J. Rice and S. Roje. 2014. Assay for … » More …

2013

 

Yurgel*, S.N., J. Rice, and M.L. Kahn. 2013. Transcriptome analysis of the role of GlnD/GlnBK in nitrogen stress adaptation by Sinorhizobium meliloti Rm1021. PLoS ONE. 8. Yurgel, S.N., M.W. Mortimer, J. Rice, J. Humann, and M.L. Kahn. 2013. Directed construction and analysis of a Sinorhizobium meliloti pSymA deletion mutant library. Appl Environ Microbiol. 79:2081-2087. Yurgel*, S.N., J. Rice, M. Mudler, M.L. Kahn, V. Belova, and M. Roumiantseva. 2013 Truncated betB2-144 plays a critical role in Sinorhizobium meliloti Rm2011 osmoprotection and glycine-betaine catabolism. Eur J Soil Biol. 54:48-55.

2014

Yurgel, S.N., Rice, J., Domreis, E., Lynch, J., Sa, N., Qamar, Z., Rajamani, S., Gao, M., Roje, S., and Bauer, W. 2014. Sinorhizobium meliloti flavin secretion and bacteria-host interaction: Role of the bifunctional RibBA protein. Mol. Plant Microbe Interact. 27:437-445.

 

2014

 

Humann JL, Kahn ML. 2014. Genes Involved in Desiccation Resistance of Rhizobia and Other Bacteria.  In Biological Nitrogen Fixation (de Bruijn, F.J., ed.), John Wiley & Sons, Inc., Hoboken, NJ.  http://dx.doi.org/10.1002/9781119053095.ch39

2013

 

Yurgel, S.N., Mortimer, M.W., Rice, J.T., Humann, J.L. and Kahn, M.L. 2013. Directed Construction and Analysis of a Sinorhizobium meliloti pSymA Deletion Mutant Library. Appl. Environ. Microbiol. 79(6):2081-2087. Yurgel, S.N., Rice, J., Mudler, M., Kahn, M.L., Belova, V. and Roumiantseva, M. 2013. Truncated betB2-144 plays a critical role in Sinorhizobium meliloti Rm2011 osmoprotection and glycine-betaine catabolism. Eur. J. Soil. Biol. 54:48-55 Yurgel, S.N., Rice, J., and Kahn, M.L. 2013 Transcriptome analysis of the role of GlnD/GlnBK in nitrogen stress adaptation by Sinorhizobium meliloti Rm1021. PLoS One 8(3):e58028.

2014

 

Kim, S.-J., Vassão, D.G., Moinuddin, S.G.A., Bedgar, D.L., Davin, L.B., and Lewis, N.G.  2014. Allyl/propenyl phenol synthases from the creosote bush and engineering production of specialty/commodity chemicals, eugenol/isoeugenol, in Escherichia coli.  Arch. Biochem. Biophys. 541: 37-46. http://dx.doi.org/10.1016/j.abb.2013.10.019 Marques, J.V., Dalisay, D.S., Yang, H., Lee, C., Davin, L.B., and Lewis, N.G.  2014. A multi-omics strategy resolves the elusive nature of alkaloids in Podophyllum species. Mol. BioSyst. 10: 2838-2849. http://dx.doi.org/10.1039/c4mb00403e Seneviratne, H.K., Dalisay, D.S., Kim, K.-W., Moinuddin, S.G.A., Yang, H., Davin, L.B., and Lewis, N.G.  2014. Non-host disease resistance response in pea (Pisum sativum) pods:  Biochemical function of DRR206 and phytoalexin pathway localization. Phytochemistry 113: … » More …

2013

Costa, M.A., Marques, J.V., Dalisay, D.S., Herman, B., Bedgar, D.L., Davin, L.B., and Lewis, N.G.  2013. Transgenic hybrid poplar for sustainable and scalable production of the commodity/specialty chemical, 2-phenylethanol. PloS One 8(12): e83169. http://dx.doi.org/10.1371/journal.pone.0083169 Cuthbertson, D.J., Johnson, S.R., Piljac-Žegarac, J., Kappel, J., Schäfer, S., Wüst, M., Ketchum, R.E.B., Croteau, R.B., Marques, J.V., Davin, L.B., Lewis, N.G., Rolf, M., Kutchan, T.M., Soejarto, D.D., and Lange, B.M.  2013. Accurate mass – time tag library for LC/MS-based metabolite profiling of medicinal plants. Phytochemistry 91: 187-197. http://dx.doi.org/10.1016/j.phytochem.2013.02.018 Lee, C., Bedgar, D.L., Davin, L.B., and Lewis, N.G.  2013. Assessment of a putative proton relay in Arabidopsis cinnamyl alcohol … » More …

2012 and prior

1.  Williams, D.E., Dalisay, D.S., Li, F., Amphlett, J., Maneerat, W., et al. Nahuoic acid A produced by a Streptomyces sp. isolated from a marine sediment is a selective SAM- competitive inhibitor of the histone methyltransferase SETD8. Organic Letters, 2012, 15, 414-417. DOI: 10.1021/ol303416k.

2.  Noro, J.C., Kalaitzis, J.A., Williams, D.E., Dalisay, D.S., Andersen, R.J., and Neilan, B.A. Tyrocidine a from a haliclona sponge derived Vibrio sp. Planta Medica, 2012, 78, 1161. DOI: 10.1055/s-0032-1320761.

3.  Williams, D.E., Dalisay, D.S., Patrick, B.O., Matainaho, T., Andrusiak, K., Deshpande, R., Myers, C.L., Piotrowski, J.S., Boone, C., Yoshida, M., Andersen, R. J. “Padanamides A and B, highly modified linear … » More …

Washington State University